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Good Code Editors for Scientists: A Comprehensive Guide

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Choosing the Right Code Editor

When delving into coding tutorials, you might have encountered the term "text editor." You may have wondered if this refers to something akin to Microsoft Word or Google Docs. While these programs are indeed text editors, they are not designed for coding.

Text editors are simpler and specifically cater to the needs of code development, unlike word processors that add unnecessary formatting data.

Why Not Use Word or Google Docs?

Both Word and Google Docs include additional formatting elements that can interfere with the execution of your code. These applications introduce peculiar indents, fonts, and paragraph styles—elements that can confuse a code interpreter when you attempt to run your scripts.

Here’s an example in Python that illustrates the importance of proper indentation:

def cool_function():

a = 123

b = 456

print("These indents are good!")

Text editors ensure that only the characters you enter are included in your code. They strip away any extraneous formatting, presenting just the code. Furthermore, they often employ color coding to distinguish between variables, strings, classes, and other elements.

Selecting the Best Text Editor for Your Needs

There are various types of text editors available. Some offer a blank text space for coding, such as Sublime Text and Notepad++. Others, like Kaggle, Google Colab, and Jupyter, allow you to execute your code in segments within a “notebook” format.

User interface of Kaggle notebook

Additionally, there are web-based editors like Cloud9 and CodePen, and comprehensive software development environments like PyCharm, Visual Studio, and Android Studio.

Your choice of editor will depend on your coding style and the preferences of your instructors or employers. For instance, if you are creating small scripts or a Flask website, you might prefer Sublime Text or Notepad++. Conversely, for larger applications or enterprise-level projects, an IDE like PyCharm or Visual Studio may be more suitable.

If your focus is on data exploration or visualizing data through graphs, a notebook format like those offered by Kaggle, Colab, or Jupyter could be ideal, especially in academic settings.

Finding Your Preferred Tool

Ultimately, the best text editor is one that aligns with your workflow. Just as musicians discover their preferred instruments, programmers will naturally gravitate toward the editors that suit their needs best. While some combinations may be less effective—such as using Notepad++ for mobile app coding—there's no definitive "wrong" choice.

Sublime Text interface

At Proto, we favor Sublime Text. Although it comes with a price tag, you can download a trial version for free. It’s compatible with Windows, Linux, and Mac, allowing users to determine if it's the right fit for their coding needs.

Advantages of Notebook-Style Editors

  1. No installation required—just log into the website (e.g., Kaggle.com).
  2. Create graphs instantly without needing to export individual image files.
  3. Easily share your code with a global community.

Benefits of IDEs

  1. Offers code hints and advanced auto-completion features.
  2. Visualize all project files in a unified interface.
  3. Built-in command line for easier project interaction.
  4. Often integrates with version control systems like Git and GitHub.

Perks of Simple Editors like Sublime and Notepad++

  1. Minimalistic and straightforward installation.
  2. Highly customizable to fit personal preferences.
  3. Basic auto-completion and auto-indentation features.
  4. Lightweight interface that enhances user experience.

Questions and Feedback

If you have any questions or comments, feel free to reach out to us at [email protected] or connect with us on Instagram (@protobioengineering).

If you found this guide helpful, consider supporting us by buying us a coffee!

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